-Genomic Data for Pho4 Links
Protein
UniPROBE Accession Number
UP00332
Species
Saccharomyces cerevisiae
Domain
HLH
Name and Synonyms
Name: None Available.
Synonyms:Phosphate system positive regulatory protein PHO4, YFR034C
Description
Basic helix-loop-helix (bHLH) transcription factor; binds cooperatively with Pho2p to the PHO5 promoter; function is regulated by phosphorylation at multiple sites and by phosphate availability
-PBM Motif Data for Pho4
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
GCACGTGC
PWM
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Top Kmer
GCACGTGC E.S. 0.499
GCACGTGC E.S. 0.499
PBM-Derived DNA Binding Site Motif (BEEML-PBM) (AMADID # 015681)
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PWM
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Consensus
NNVCACGNKN
NMNCGTGBNN
PBM-Derived DNA Binding Site Motif (BEEML-PBM) (AMADID # 016060)
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PWM
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Consensus
NNVCACGHKN
NMDCGTGBNN
Downloads
Download the zip of all Pho4 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Pho4 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=332&sourceDB=uniprobe

-Pho4 Datasets
Gene Clone Type Last Modified Save View
Pho4 Full length clone 2014-07-16 search save
Pho4 Insert Sequence
1    MGRTTSEGIH GFVDDLEPKS SILDKVGDFI TVNTKRHDGR EDFNEQNDEL
51   NSQENHNSSE NGNENENEQD SLALDDLDRA FELVEGMDMD WMMPSHAHHS
101  PATTATIKPR LLYSPLIHTQ SAVPVTISPN LVATATSTTS ANKVTKNKSN
151  SSPYLNKRRG KPGPDSATSL FELPDSVIPT PKPKPKPKQY PKVILPSNST
201  RRVSPVTAKT SSSAEGVVVA SESPVIAPHG SSHSRSLSKR RSSGALVDDD
251  KRESHKHAEQ ARRNRLAVAL HELASLIPAE WKQQNVSAAP SKATTVEAAC
301  RYIRHLQQNV ST



References
Data are analyzed by array design with AMADID # in Zhu et al., Genome Res 2009


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